BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B09LP1|AL428675
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1752 0.0
3x_Contig1557 161 3e-39
3x_Contig1518 153 7e-37
3x_Contig1663 151 3e-36
3x_Contig1374 151 3e-36
3x_Contig1446 149 1e-35
3x_Contig1521 145 2e-34
3x_Contig1741 113 6e-25
3x_Contig1272 111 2e-24
>3x_Contig1428
Length = 9146
Score = 1752 bits (884), Expect = 0.0
Identities = 887/888 (99%)
Strand = Plus / Minus
Query: 1 gatctttagtcagttgataattacgattcacgctttcgattcacgctttagatctgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6713 gatctttagtcagttgataattacgattcacgctttcgattcacgctttagatctgaggg 6654
Query: 61 acattttcctcaacaggaaagggcataccccttacgaaaatacattgtcaaatacctatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6653 acattttcctcaacaggaaagggcataccccttacgaaaatacattgtcaaatacctatg 6594
Query: 121 gaaccatatgagtaattgaggttccctatcaaagctggattgccatatgtacaaattaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6593 gaaccatatgagtaattgaggttccctatcaaagctggattgccatatgtacaaattaac 6534
Query: 181 catgacaccggaatgggcctgtgacagcattctccgaacttatacgagttatgtgacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6533 catgacaccggaatgggcctgtgacagcattctccgaacttatacgagttatgtgacttg 6474
Query: 241 ctcagtatatcaattattatccgatatagtgtaacggctatcacatcacgctttcaccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6473 ctcagtatatcaattattatccgatatagtgtaacggctatcacatcacgctttcaccgt 6414
Query: 301 ggagaccggggttcgactccccgtatcggagtatctttttatttgaagcctatctactta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6413 ggagaccggggttcgactccccgtatcggagtatctttttatttgaagcctatctactta 6354
Query: 361 gtagatgaacgaccgtgtgataaacttgtttcgaccggaaagaccgtctcctcaaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6353 gtagatgaacgaccgtgtgataaacttgtttcgaccggaaagaccgtctcctcaaattca 6294
Query: 421 caaagctccaacccctacctgtgacaacagcataccaacgtaaaatgtttttttttttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6293 caaagctccaacccctacctgtgacaacagcataccaacgtaaaatgtttttttttttat 6234
Query: 481 ttccttagtgctttaaagtccaattgactaacgattaatacacagttataaaattttgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6233 ttccttagtgctttaaagtccaattgactaacgattaatacacagttataaaattttgga 6174
Query: 541 cgacatgacttatttaacattgccggatctggttagctcacatgagttagtggtgttttt 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6173 cgacatgacttatttaacattgccggatctggttagctcacatgagtaagtggtgttttt 6114
Query: 601 acgccaacactaaggaatctaacctatgtacggctgttgatacttccttctctgttccgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6113 acgccaacactaaggaatctaacctatgtacggctgttgatacttccttctctgttccgt 6054
Query: 661 ctaatagccatacctgtgttaaaatacactctttctcatgcgatacaatattattattta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6053 ctaatagccatacctgtgttaaaatacactctttctcatgcgatacaatattattattta 5994
Query: 721 agcgttgcaaagtggataaattgcggaaatgaaagcttgccattatgtgttggtacgatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5993 agcgttgcaaagtggataaattgcggaaatgaaagcttgccattatgtgttggtacgatg 5934
Query: 781 aatgtgaaatgtagtgatgccatttcttgggatcatttcttggcaatttcacagaaatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5933 aatgtgaaatgtagtgatgccatttcttgggatcatttcttggcaatttcacagaaatag 5874
Query: 841 tgataaattcgaatccacttgagtcaatgtcaaatagttctgtgacta 888
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5873 tgataaattcgaatccacttgagtcaatgtcaaatagttctgtgacta 5826
>3x_Contig1557
Length = 10562
Score = 161 bits (81), Expect = 3e-39
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 256 attatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 attatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcg 2597
Query: 316 actccccgtatcggagtatcttttt 340
||||||||||||||||||| |||||
Sbjct: 2598 actccccgtatcggagtattttttt 2622
>3x_Contig1518
Length = 11021
Score = 153 bits (77), Expect = 7e-37
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 258 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5819 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 5760
Query: 318 tccccgtatcggagtat 334
|||||||||||||||||
Sbjct: 5759 tccccgtatcggagtat 5743
>3x_Contig1663
Length = 13533
Score = 151 bits (76), Expect = 3e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 259 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 915
Query: 319 ccccgtatcggagtat 334
||||||||||||||||
Sbjct: 916 ccccgtatcggagtat 931
>3x_Contig1374
Length = 8985
Score = 151 bits (76), Expect = 3e-36
Identities = 86/88 (97%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 258 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8892 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 8833
Query: 318 tccccgtatcggag-tatctttttattt 344
|||||||||||||| | |||||||||||
Sbjct: 8832 tccccgtatcggagttttctttttattt 8805
>3x_Contig1446
Length = 10598
Score = 149 bits (75), Expect = 1e-35
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 258 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3306 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 3247
Query: 318 tccccgtatcggagt 332
|||||||||||||||
Sbjct: 3246 tccccgtatcggagt 3232
>3x_Contig1521
Length = 8057
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 260 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237
Query: 320 cccgtatcggagt 332
|||||||||||||
Sbjct: 4236 cccgtatcggagt 4224
>3x_Contig1741
Length = 21706
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 259 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 318
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 9345 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 9286
Query: 319 ccccgtatcggag 331
||| |||||||||
Sbjct: 9285 cccggtatcggag 9273
>3x_Contig1272
Length = 8315
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 260 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 319
|||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 5215 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 5156
Query: 320 cccgtatcggag 331
|| |||||||||
Sbjct: 5155 ccggtatcggag 5144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,931
Number of Sequences: 1807
Number of extensions: 10931
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 9
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)